mrTools

Version 4.8 (1.96 MB) by Justin Gardner
mrTools - matlab based tools for fMRI
5.0
(6)
29 Downloads
Updated 16 Feb 2023
View License on GitHub

mrTools Overview

mrTools provides a set of Matlab tools to analyze fMRI data. It can do basic analyses like correlation analyses used in retinotopy experiments, event-related, population RF and GLM analyses. It can display the results of analyses on inplane anatomies, flat maps and surfaces. It is designed to make it easy to write your own script and programs in Matlab to analyze your data.

mrTools Documentation

Full documentation can be found here: https://gru.stanford.edu/doku.php/mrtools/overview

mrTools Citation

Gardner, Justin L., Merriam, Elisha P., Schluppeck, Denis, Besle, Julien, & Heeger, David J. (2018, June 28). mrTools: Analysis and visualization package for functional magnetic resonance imaging data (Version 4.7). Zenodo. http://doi.org/10.5281/zenodo.1299483

Screen shots

Event-related analysis

Event-related analysis

Surfaces and flat-maps

Surface and flat-maps

Retinotopy

Retinotopy

Correlation analysis

Correlation analysis

Population receptive-fields

Population receptive-field

Cite As

Justin Gardner (2024). mrTools (https://github.com/justingardner/mrTools/releases/tag/v4.8), GitHub. Retrieved .

MATLAB Release Compatibility
Created with R2023b
Compatible with any release
Platform Compatibility
Windows macOS Linux
Categories
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mrAlign

mrLoadRet

mrLoadRet/Analysis

mrLoadRet/Analysis/AverageTSeries

mrLoadRet/Analysis/ConcatTSeries

mrLoadRet/Analysis/CorAnal

mrLoadRet/Analysis/EventRelated

mrLoadRet/Analysis/MotionComp

mrLoadRet/Analysis/QuickAnalysis

mrLoadRet/Analysis/SignalProc

mrLoadRet/Edit

mrLoadRet/File

mrLoadRet/GUI

mrLoadRet/Init

mrLoadRet/Plot

mrLoadRet/Plugin

mrLoadRet/Plugin/Default

mrLoadRet/Plugin/GLM_v2

mrLoadRet/Plugin/GLM_v2/combineTransformOverlayFunctions

mrLoadRet/Plugin/GLM_v2/interrogatorFunctions

mrLoadRet/Plugin/GLM_v2/newGlmAnalysis

mrLoadRet/Plugin/GLM_v2/transformROIFunctions

mrLoadRet/Plugin/mlrAnatomy

mrLoadRet/Plugin/pRF

mrLoadRet/PluginAlt/Nottingham/classificationAnalysis

mrLoadRet/PluginAlt/Nottingham/fsl

mrLoadRet/PluginAlt/Nottingham/viewGUI

mrLoadRet/PluginAlt/mlrAnatDB

mrLoadRet/PluginAlt/mlrLife

mrLoadRet/PluginAlt/modelCoranalFromGlm

mrLoadRet/ROI

mrLoadRet/View

mrLoadRet/colormapFunctions

mrUtilities/File

mrUtilities/File/Caret

mrUtilities/File/Dicom

mrUtilities/File/FreeSurfer

mrUtilities/File/Glasser

mrUtilities/File/Nifti

mrUtilities/File/Varian

mrUtilities/File/mlrImage

mrUtilities/File/neuropythy

mrUtilities/ImageProcessing

mrUtilities/MatlabUtilities

mrUtilities/Plot

mrUtilities/make

mrUtilities/mrFlatMesh

mrUtilities/surfUtils

Version Published Release Notes
4.8

To view or report issues in this GitHub add-on, visit the GitHub Repository.
To view or report issues in this GitHub add-on, visit the GitHub Repository.