Trim sequences based on specified criterion
seqtrim(
trims
the sequences in fastqFile
)fastqFile
and saves the trimmed
sequences in new FASTQ files. By default, the trimmed sequences are
saved under file names with the suffix '_trimmed'
appended.
If you do not specify any trimming criterion, the function trims sequences
using the default.
seqtrim(
uses
additional options specified by one or more fastqFile
,Name,Value
)Name,Value
pair
arguments.
[
returns a cell array outFiles
,nSeqTrimmed
,nSeqUntrimmed
]
= seqtrim(___)outFiles
with
the names of output files. nSeqTrimmed
and nSeqUntrimmed
represent
the numbers of sequences trimmed and untrimmed from each input file,
respectively.