Neuron counting

Count the number of fluorescent cells (tagged with GFP) on noisy background fluorescence

Version 1.6.0.0 (11.4 KB)
2.2K Downloads
(4)
5 Mar 2010

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% Matlab GUI for neuron counting
% frequency filtering to remove background fluorescence
% Otsu's method for thresholding, with user interaction
% Original image courtesy of Lan Guo

Cite As

EMC_solver (2026). Neuron counting (https://ch.mathworks.com/matlabcentral/fileexchange/26798-neuron-counting), MATLAB Central File Exchange. Retrieved .

Acknowledgements

Inspired by: Image overlay

Categories

Find more on Biomedical Imaging in Help Center and MATLAB Answers

General Information

MATLAB Release Compatibility

  • Compatible with any release

Platform Compatibility

  • Windows
  • macOS
  • Linux
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Version Published Release Notes
1.6.0.0

new GUI interface, tophat for preprocessing, optional outlining colors
1.5.0.0

include colormap for color image display
1.2.0.0

GUI version was made

1.0.0.0