DynaSim/DynaSim
DynaSim
This is the home of the DynaSim Toolbox for modeling and simulating dynamical systems in MATLAB and GNU Octave!
See the DynaSim Toolbox in action, with Getting started tutorial and the UnbiasedCompetition demonstration live script.
Quick Install:
- Full instructions are online.
- In brief:
- Download the toolbox, and add it to your MATLAB or GNU Octave path.
- Download it as a Zip file or clone it from the Terminal:
git clone https://github.com/DynaSim/DynaSim.git
- Download it as a Zip file or clone it from the Terminal:
- Add to path using startup.m or Command Window:
addpath(genpath('YOUR/PATH/TO/DynaSim'))
- Download the toolbox, and add it to your MATLAB or GNU Octave path.
Documentation:
- Complete documentation is available online.
- Get started with the DynaSim tutorial.
- A browsable function reference is available here.
Citation
If you use DynaSim for your published research, please cite this introductory article:
Sherfey JS, Soplata AE, Ardid S, Roberts EA, Stanley DA, Pittman-Polletta BR and Kopell NJ (2018) DynaSim: A MATLAB Toolbox for Neural Modeling and Simulation. Front. Neuroinform. 12:10. doi: 10.3389/fninf.2018.00010
Other References:
- Example modeling projects: PFC networks, Thalamus.
- Report issues here.
Mailing lists:
- Join the user mailing list to ask questions and discuss DynaSim.
- Join the developer mailing list to participate in development discussion.
Cite As
Jason Sherfey (2024). DynaSim/DynaSim (https://github.com/DynaSim/DynaSim/releases/tag/v1.1), GitHub. Retrieved .
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demos
demos/devDemos
demos/examples
demos/examples/Meanfield_NMDA_WMDM
demos/examples/Multicompartment_PFC_neurons
demos/examples/NetworkResonance_tutorial
demos/examples/UnbiasedCompetitionPNAS2019_tutorial
functions
functions/dependencies
functions/dependencies/Coverage/Coverage
functions/dependencies/Coverage/Coverage/lib/absolutepath
functions/dependencies/Coverage/Coverage/src/+edu/+stanford/+covert/+test
functions/dependencies/DataHash_20160618
functions/dependencies/MDD
functions/dependencies/MDD/classes
functions/dependencies/MDD/classes/@MDD
functions/dependencies/MDD/dependencies
functions/dependencies/MDD/dependencies/catstruct
functions/dependencies/MDD/dependencies/kakearney-boundedline-pkg-32f2a1f/boundedline
functions/dependencies/MDD/dependencies/kakearney-boundedline-pkg-32f2a1f/catuneven
functions/dependencies/MDD/dependencies/kakearney-boundedline-pkg-32f2a1f/singlepatch
functions/dependencies/MDD/dependencies/subplot_grid
functions/dependencies/MDD/functions
functions/dependencies/MDD/junk
functions/dependencies/MDD/library_plots
functions/dependencies/MDD/templates
functions/dependencies/MapN
functions/dependencies/Octave
functions/dependencies/altmany-export_fig-2763b78
functions/dependencies/compareFigFiles
functions/dependencies/distinguishable_colors
functions/dependencies/ear
functions/dependencies/github-sync-matlab
functions/dependencies/github-sync-matlab/private
functions/dependencies/isfunction
functions/dependencies/m2html
functions/dependencies/m2html/@template
functions/dependencies/m2html/@template/private
functions/dependencies/m2html/private
functions/dependencies/mathworks_exchange/uigetvar_putvar
functions/dependencies/mtit
functions/dependencies/subplot_grid
functions/dependencies/tight_subplot
functions/internal
functions/internal/xp_libraries
models
demos/examples
demos/examples/Meanfield_NMDA_WMDM
demos/examples/NetworkResonance_tutorial
demos/examples/UnbiasedCompetitionPNAS2019_tutorial
Versions that use the GitHub default branch cannot be downloaded
Version | Published | Release Notes | |
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1.1 | See release notes for this release on GitHub: https://github.com/DynaSim/DynaSim/releases/tag/v1.1 |
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1.0.0.0 | reformatted description Updated the documentation link.
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