96 results

Matlab code for interacting with the Open Ephys GUI.

abfload imports data in the Axon abf format (three different recording modes).

a version of abfload which is capable of reading abf 2.0 files

This is a tutorial for key data analysis steps used by neuroscientists - filtering, spike extraction, PCA, clustering, and spectral analysis

MATLAB toolbox for spike-train community detection

Plotting Routine to display neural spike trains

Set of functions for the basic analysis of spike data from neurophysiological experiments

Anakyze spike trains exported from multi-electrode arrays

MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is pa

Obtains the current source density from local field potential data recorded from a linear electrode array

A spike raster plot from spike time stamps with optional trial and group data.

Fast and accurate spike sorting toolbox

This video-based course introduces learners to the power of MATLAB in different areas of neuroscience. Each module covers a different topic.

Read files generated by the Intan Technologies GUI for recording multichannel data.

Matlab class to import HEKA Patchmaster files

A MEX function to read a PLX data file (Plexon, Inc.).

Automated manual curation and cell classification of spike-sorted electrophysiology data in MATLAB. Fine-tuned for kilosorted Neuropixels da

Kernel density estimation with bandwidths locally adapted to data.

Toolbox for batch analysis of postsynaptic current from neuronal recording

Utilities for managing Neuropixel SpikeGLX datasets, Kilosort2 sorting, waveform extraction and other tools

UltraMegaSort2000 - spike sorting and quality metrics of extracellular spike data

Calculates AP amplitude and timing, half-widths, threshold voltage, and frequency of firing

An application for acquiring neurophysiology data in Matlab

Required analysis codes for the joint analysis which we have introduced in Kapucu et al. (2015).

Detect spike threshold in membrane potential using phase space V versus dV/dt.

Import and Plot WinWCP Patch Clamp Electrophysiology Files into MATLAB

Complementary files to the book "Braiding technology for textiles"

Spike sorting program for extracellular recordings. Version 1.4

Algorithm from Fraser and Schwartz, "Recording from the same neurons chronically in motor cortex"

SincResample resamples signals to arbitrary lengths/frequencies and/or timeshifts them

Computes the peri-stimulus time histogram for neural spike times

Matlab-based spike sorter for NEV files

Repository for experiments with BackyardBrains Hardware

Accelerating speech prosthesis development with Simulink-based real-time neural decoding and audio synthesis

Performs offline series resistance correction/compensation of recorded currents

Automated analysis of spike count frequency, io curves and AP properties from WinWCP files.

remove spikes from signals

A behavioural model for Analogue Front End for developing neural spike sorting systems

Real time channel streaming with the CED's Power1401 device.

Spike Detection

Analyze neural spike train and continuous time data using point process methods

A class wrapper for the MODTRAN 5 atmospheric radiative transfer code.

Generate spike vector time series (SPKVEC) from the TIMESTAMPS of the spikes.

This function identifies and removes spikes fra a trace of and membrane potential recording.

Find elements within many ranges. Faster than find() for large N. Useful for PSTHs and rasterplots.

Instructions and m-files for setting up a remote-controlled multielectrode dish perfusion system.

A MATLAB implementation of the DeepInterpolation principle.

A MATLAB toolbox for interacting with the Allen Brain Observatory

An algorithm for unsupervised discovery of sequential structure

Spike Extraction Tool

MBL NS&B Leech Module

Performs a locally weighted robust regression on multidimensional scattered data

Plotting and Analysis of Neuroscience Database-Oriented Research Applications

Technique for looking at open-field phase precession in grid and place cells.

This repository contains a Japanese version of a published repository "Electrophysiology tutorial for neuroscience" by Shubo Chakrabarti htt

Data Acquisition System

Single electrode extracellular recording simulator

Graphical user interface for analyzing neuronal ensembles given a raster matrix of neuronal activity.

Multi-Dimensional Data Visualization

GUI for automatic action potential detection of membrane potential recordings