How to crop a matrix/array based on a condition
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I have a matrix consisting of 10 columns/arrays. First 9 are my data. The 10th column/array is a "trigger channel" which has sharp spikes from baseline 0V to 5V and back down to 0V. I need to crop all my columns/arrays in the matrix into sections, from spike to spike in the 10th channel. First "section" is from spike 1 to spike 2, second "section" is from spike 2 to spike 3, and so on. How would I go about doing this?
Edit: My matrix:
38 64 5
35 55 0
24 42 0
14 36 0
25 63 0
93 23 5
23 52 0
24 95 0
24 64 0
46 23 5
24 68 0
48 22 0
18 42 5
35 55 0
24 42 0
14 36 5
25 63 0
93 23 0
23 52 0
24 95 0
I need to horizontally cut the matrix shown above into smaller matrices. Each "submatrix" should start and end with when the third array changes from 0 to 5. The matrix above should be cropped into 5 matrices.
5 Comments
Azzi Abdelmalek
on 24 Jun 2016
Can you post a short example? a 6x3 matrix for example, and post the expected result
Karan Gill
on 24 Jun 2016
To crop a matrix/array based on a condition, logical indexing is what you use: http://blogs.mathworks.com/loren/2013/02/20/logical-indexing-multiple-conditions/
Of course, your specific situation might not be so straightforward.
Image Analyst
on 26 Jun 2016
Attach your data with the paper clip icon.
Meng Xi Zhu
on 28 Jun 2016
%%%modify these
%%%in must be column major
%%%trigger must be column major and have same # of column as in
in = [
38 64 5;
35 55 0;
24 42 0;
14 36 0;
25 63 0;
93 23 5;
23 52 0;
24 95 0;
24 64 0;
46 23 5;
24 68 0;
48 22 0;
18 42 5;
35 55 0;
24 42 0;
14 36 5;
25 63 0;
93 23 0;
23 52 0;
24 95 0;];
in = in';
trigger = in(3,:);
in = in(1:2,:);
threshold = 2;
%%%end modify
num_subarray = sum(trigger>threshold);
out = cell(num_subarray,1);
prev_i = 0;
out_i = 1;
for i = 1:numel(trigger)
if(trigger(i) > threshold)
num_ele = i - prev_i;
out{out_i} = zeros(size(in,1),num_ele);
out{out_i}(:,1:num_ele) = in(:,prev_i+1:i);
out_i = out_i + 1;
prev_i = i;
end
end
%%%output stored in out
%%%each submatrix is accessed by out{i}
%%%each submatrix element is accessed by out{i}(j,k)
Image Analyst
on 28 Jun 2016
This does NOT have 10 columns. It has 3. So is the last column the "spike" column? If so, the spikes are easily found and the problem is solved very easily with the regionprops() function.
Answers (1)
Andrei Bobrov
on 28 Jun 2016
Edited: Andrei Bobrov
on 28 Jun 2016
A = [38 64 5
35 55 0
24 42 0
14 36 0
25 63 0
93 23 5
23 52 0
24 95 0
24 64 0
46 23 5
24 68 0
48 22 0
18 42 5
35 55 0
24 42 0
14 36 5
25 63 0
93 23 0
23 52 0
24 95 0]
m = size(A,1);
out = accumarray(cumsum(A(:,3) > 0),(1:m)',[],@(x){A(x,:)});
or
trsh = 2;
t = [true;diff( A(:,3) > trsh)==-1];
z = find(t,1,'last')-1;
a = A(1:z,1:end-1);
out = accumarray(cumsum(t(1:z)),(1:z)',[],@(x){a(x,:)});
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