You need to install wmname
dnf install wmname
apt-get install wmname
Now you should change the window manager name to LG3D. Before executing matlab, run
wmname LG3D
matlab
Permanently setting wmname
For some reason, you can’t just add wmname LG3D to .bashrc. Maybe the window manager needs to be enabled first. Instead, I created a shadow matlab script that sets the command everytime.
I assume you are running all commands as root. You can change to root with the sudo -i command.
To do this, move the old Matlab launcher
cd /usr/local/MATLAB/R2016b/bin
mv matlab matlab_actual
Now create a new file called matlab with the following content
#!/bin/sh
wmname LG3D
/usr/local/MATLAB/R2016a/bin/matlab_actual "$@"
Make sure you use "$@" and not just $@ as explained here.
Now make sure the new file is executable
chmod +x matlab