Exploring Protein-DNA Binding Sites from Paired-End ChIP-Seq Data

MATLAB code for the "Exploring Protein-DNA Binding Sites from Paired-End ChIP-Seq Data" webinar.

This file shows how to use MATLAB and Bioinformatics Toolbox for a typical ChIP-Seq workflow. Key topics include:
Peak detection using wavelet denoising
Working with paired end short reads
Generating coverage plots