Mid-Space-Independent and IDIR Deformable Image Registration

Version 2.0 (24.2 KB) by Iman Aganj
2D and 3D deformable image registration using the mid-space-independent (MSI) and intermediate deformable image registration (IDIR) methods.
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Updated 6 Feb 2023

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These are codes for 2D and 3D deformable image registration, using the mid-space-independent (MSI; Aganj et al, NeuroImage 2017) and the intermediate deformable image registration (IDIR; Aganj & Fischl, ISBI 2023) approaches.
See EXAMPLE_MSI.m and EXAMPLE_IDIR.m for short tutorials. If available, GPUs can be used to speed up the registration.

Cite As

Iman Aganj (2024). Mid-Space-Independent and IDIR Deformable Image Registration (https://www.mathworks.com/matlabcentral/fileexchange/61392-mid-space-independent-and-idir-deformable-image-registration), MATLAB Central File Exchange. Retrieved .

I. Aganj, J. E. Iglesias, M. Reuter, M. R. Sabuncu, and B. Fischl, "Mid-space-independent deformable image registration," NeuroImage, vol. 152, pp. 158-170, 2017. http://doi.org/10.1016/j.neuroimage.2017.02.055

I. Aganj and B. Fischl, "Intermediate deformable image registration via windowed cross-correlation," in Proc. IEEE International Symposium on Biomedical Imaging, pp. 1-5, Cartagena de Indias, Colombia, 2023.

MATLAB Release Compatibility
Created with R2022b
Compatible with any release
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Version Published Release Notes
2.0

Intermediate deformable image registration (IDIR; Aganj & Fischl, ISBI 2023) has been added. See EXAMPLE_IDIR.
1.2.0.1

Minor update.
1.2.0.0

A compilable command-line interface (MSI_CLI) has been added.
1.1.0.0

Minor edits.
1.0.0.0